Source | us.nlm.vsac#0.11.0:null (v4.0.1) |
resourceType | ValueSet |
id | 2.16.840.1.113762.1.4.1146.2172 |
canonical | http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.2172 |
version | 20230602 |
status | active |
publisher | CSTE Steward |
name | VirusesCausingEncephalitisTestsForVirusesCausingEncephalitisNucleicAcidInUnspecifiedSpecimen |
title | Viruses [Causing Encephalitis] (Tests for Viruses Causing Encephalitis Nucleic Acid in Unspecified Specimen) |
date | 2023-06-02T01:03:51-04:00 |
Usages | (none) |
This value set contains 202 concepts
Code | System | Display |
11483-5 | http://loinc.org | Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection |
16130-7 | http://loinc.org | Herpes simplex virus 1 DNA [Presence] in Specimen by NAA with probe detection |
16131-5 | http://loinc.org | Herpes simplex virus 2 DNA [Presence] in Specimen by NAA with probe detection |
20444-6 | http://loinc.org | Herpes simplex virus 1+2 DNA [Presence] in Specimen by NAA with probe detection |
22827-0 | http://loinc.org | Influenza virus A subtype [Identifier] in Specimen by NAA with probe detection |
23553-1 | http://loinc.org | Venezuelan equine encephalitis virus subtype [Identifier] in Specimen by NAA with probe detection |
24041-6 | http://loinc.org | Cytomegalovirus DNA [Units/volume] (viral load) in Specimen by Probe with signal amplification |
25836-8 | http://loinc.org | HIV 1 RNA [#/volume] (viral load) in Specimen by NAA with probe detection |
25842-6 | http://loinc.org | HIV 2 proviral DNA [Presence] in Specimen by NAA with probe detection |
29495-9 | http://loinc.org | Herpes virus 6 DNA [Presence] in Specimen by NAA with probe detection |
29591-5 | http://loinc.org | Enterovirus RNA [Presence] in Specimen by NAA with probe detection |
30554-0 | http://loinc.org | HIV reverse transcriptase gene mutations detected [Identifier] |
33006-8 | http://loinc.org | Cytomegalovirus DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
33027-4 | http://loinc.org | Herpes simplex virus+Varicella zoster virus DNA [Presence] in Specimen by NAA with probe detection |
33630-5 | http://loinc.org | HIV protease gene mutations detected [Identifier] |
33631-3 | http://loinc.org | Cytomegalovirus UL54 gene mutations detected [Identifier] |
33632-1 | http://loinc.org | Cytomegalovirus UL54+UL97 gene mutations detected [Identifier] |
33940-8 | http://loinc.org | Herpes virus 6 DNA [Presence] in Tissue by NAA with probe detection |
34487-9 | http://loinc.org | Influenza virus A RNA [Presence] in Specimen by NAA with probe detection |
34700-5 | http://loinc.org | HIV reverse transcriptase+protease gene mutations tested for |
34720-3 | http://loinc.org | Cytomegalovirus DNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
35396-1 | http://loinc.org | Enterovirus RNA [Presence] in Tissue by NAA with probe detection |
35400-1 | http://loinc.org | Varicella zoster virus DNA [Presence] in Tissue by NAA with probe detection |
37986-7 | http://loinc.org | California serogroup RNA [Presence] in Specimen by Probe |
38270-5 | http://loinc.org | Influenza virus A H7 RNA [Presence] in Specimen by NAA with probe detection |
38271-3 | http://loinc.org | Influenza virus A H6 RNA [Presence] in Specimen by NAA with probe detection |
38272-1 | http://loinc.org | Influenza virus A H5 RNA [Presence] in Specimen by NAA with probe detection |
38348-9 | http://loinc.org | Herpes virus 6 DNA [Identifier] in Specimen by NAA with probe detection |
38349-7 | http://loinc.org | Herpes virus 6 DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
38350-5 | http://loinc.org | Herpes virus 6 DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection |
38381-0 | http://loinc.org | Influenza virus A cDNA [Presence] in Specimen by NAA with probe detection |
39025-2 | http://loinc.org | Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing |
39102-9 | http://loinc.org | Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by NAA with probe detection |
39103-7 | http://loinc.org | Influenza virus A neuraminidase cDNA [Identifier] in Specimen by NAA with probe detection |
39528-5 | http://loinc.org | Adenovirus DNA [Presence] in Specimen by NAA with probe detection |
40444-2 | http://loinc.org | CMV gene mutations detected [Identifier] |
40975-5 | http://loinc.org | Adenovirus DNA [Identifier] in Specimen by RFLP |
40976-3 | http://loinc.org | Adenovirus DNA [Identifier] in Specimen by NAA with probe detection |
44263-2 | http://loinc.org | Influenza virus A RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
44264-0 | http://loinc.org | Influenza virus A H5 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
44265-7 | http://loinc.org | Influenza virus A H6 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
44266-5 | http://loinc.org | Influenza virus A H7 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
44795-3 | http://loinc.org | Influenza virus A H5 Asian RNA [Presence] in Specimen by NAA with probe detection |
45175-7 | http://loinc.org | HIV nucleoside reverse transcriptase gene mutations detected [Identifier] |
45176-5 | http://loinc.org | HIV nonnucleoside reverse transcriptase gene mutations detected [Identifier] |
47532-7 | http://loinc.org | Mumps virus RNA [Presence] in Specimen by NAA with probe detection |
48508-6 | http://loinc.org | Measles virus RNA [Presence] in Specimen by NAA with probe detection |
48510-2 | http://loinc.org | HIV 1 RNA [Log #/volume] (viral load) in Serum or Plasma by Probe and target amplification method detection limit = 1.7 log copies/mL |
49335-3 | http://loinc.org | Adenovirus DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
49340-3 | http://loinc.org | Adenovirus DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
49351-0 | http://loinc.org | Cytomegalovirus DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
49381-7 | http://loinc.org | Herpes simplex virus 1+2 DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
49382-5 | http://loinc.org | Herpes simplex virus 1+2 DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
49390-8 | http://loinc.org | Herpes virus 6 DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
49450-0 | http://loinc.org | Varicella zoster virus DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
49451-8 | http://loinc.org | Varicella zoster virus DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
49520-0 | http://loinc.org | Influenza virus A H1 RNA [Presence] in Isolate by NAA with probe detection |
49521-8 | http://loinc.org | Influenza virus A H1 RNA [Presence] in Specimen by NAA with probe detection |
49523-4 | http://loinc.org | Influenza virus A H3 RNA [Presence] in Isolate by NAA with probe detection |
49524-2 | http://loinc.org | Influenza virus A H3 RNA [Presence] in Specimen by NAA with probe detection |
49526-7 | http://loinc.org | Influenza virus A H5 RNA [Presence] in Isolate by NAA with probe detection |
49527-5 | http://loinc.org | Influenza virus A H7 RNA [Presence] in Isolate by NAA with probe detection |
49528-3 | http://loinc.org | Influenza virus A H9 RNA [Presence] in Specimen by NAA with probe detection |
49531-7 | http://loinc.org | Influenza virus A RNA [Presence] in Isolate by NAA with probe detection |
49532-5 | http://loinc.org | Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by Sequencing |
49656-2 | http://loinc.org | HIV protease gene mutations by Genotype method |
49661-2 | http://loinc.org | HIV protease gene mutations by Phenotype method |
49890-7 | http://loinc.org | HIV 1 RNA [Log #/volume] (viral load) in Specimen by NAA with probe detection |
4997-3 | http://loinc.org | Cytomegalovirus DNA [Presence] in Tissue by Probe |
4998-1 | http://loinc.org | Cytomegalovirus DNA [Presence] in Tissue by NAA with probe detection |
49986-3 | http://loinc.org | Herpes simplex virus 1 DNA [#/volume] (viral load) in Body fluid by NAA with probe detection |
49989-7 | http://loinc.org | Herpes simplex virus 2 DNA [#/volume] (viral load) in Body fluid by NAA with probe detection |
5000-5 | http://loinc.org | Cytomegalovirus DNA [Presence] in Specimen by NAA with probe detection |
5014-6 | http://loinc.org | Herpes simplex virus DNA [Presence] in Specimen by NAA with probe detection |
5018-7 | http://loinc.org | HIV 1 RNA [Presence] in Specimen by NAA with probe detection |
50700-4 | http://loinc.org | Influenza virus A.adamantane resistant RNA [Presence] by NAA with probe detection |
50702-0 | http://loinc.org | Influenza virus A matrix protein RNA [Presence] in Isolate by Sequencing |
50704-6 | http://loinc.org | Influenza virus A nucleoprotein RNA [Presence] in Isolate by Sequencing |
50705-3 | http://loinc.org | Influenza virus A non-structural protein RNA [Presence] in Isolate by Sequencing |
50706-1 | http://loinc.org | Influenza virus A polymerase A RNA [Presence] in Isolate by Sequencing |
50707-9 | http://loinc.org | Influenza virus A polymerase B1 cDNA [Presence] in Isolate by Sequencing |
50708-7 | http://loinc.org | Influenza virus A polymerase B2 RNA [Presence] in Isolate by Sequencing |
50711-1 | http://loinc.org | Influenza virus A polymerase RNA [Identifier] in Isolate by Sequencing |
50790-5 | http://loinc.org | HIV 1 RNA tropism [Identifier] |
51646-8 | http://loinc.org | Rabies virus RNA [Presence] in Specimen by NAA with probe detection |
51647-6 | http://loinc.org | Rabies virus RNA [Presence] in Specimen by Probe |
51666-6 | http://loinc.org | Japanese encephalitis virus RNA [Presence] in Specimen by NAA with probe detection |
51667-4 | http://loinc.org | Lymphocytic choriomeningitis virus RNA [Presence] in Specimen by NAA with probe detection |
53250-7 | http://loinc.org | Influenza virus A RNA [#/volume] (viral load) in Specimen by NAA with probe detection |
53256-4 | http://loinc.org | Enterovirus RNA [#/volume] (viral load) in Specimen by NAA with probe detection |
53763-9 | http://loinc.org | Cytomegalovirus DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection |
53798-5 | http://loinc.org | HIV reverse transcriptase+protease gene mutations detected [Identifier] |
53874-4 | http://loinc.org | Jamestown canyon virus RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
54091-4 | http://loinc.org | Rubella virus RNA [Presence] in Specimen by NAA with probe detection |
54243-1 | http://loinc.org | Influenza virus RNA [Identifier] in Specimen by Probe |
55133-3 | http://loinc.org | Influenza virus A hemagglutinin cDNA [Identifier] in Isolate by NAA with probe detection |
55134-1 | http://loinc.org | Influenza virus A neuraminidase RNA [Identifier] in Isolate by NAA with probe detection |
55143-2 | http://loinc.org | California serogroup RNA [Presence] in Specimen by NAA with probe detection |
55463-4 | http://loinc.org | Influenza virus A swine origin RNA [Identifier] in Specimen by NAA with probe detection |
55464-2 | http://loinc.org | Influenza virus A swine origin RNA [Presence] in Specimen by NAA with probe detection |
55465-9 | http://loinc.org | Influenza virus A H1 2009 pandemic RNA [Presence] in Specimen by NAA with probe detection |
56024-3 | http://loinc.org | Influenza virus A N1 RNA [Units/volume] (viral load) in Specimen by NAA with probe detection |
57985-4 | http://loinc.org | Influenza virus A H2 RNA [Presence] in Specimen by NAA with probe detection |
59423-4 | http://loinc.org | Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection |
59424-2 | http://loinc.org | Influenza virus A hemagglutinin type RNA [Identifier] in Isolate by NAA with probe detection |
60259-9 | http://loinc.org | Adenovirus DNA [Presence] in Isolate by NAA with probe detection |
60263-1 | http://loinc.org | Enterovirus RNA [Presence] in Isolate by NAA with probe detection |
60270-6 | http://loinc.org | Rabies virus RNA [Presence] in Isolate by NAA with probe detection |
60422-3 | http://loinc.org | Measles virus genotype [Identifier] in Specimen by NAA with probe detection |
60429-8 | http://loinc.org | Enterovirus 71 RNA [Presence] in Isolate by NAA with probe detection |
60461-1 | http://loinc.org | Herpes simplex virus 1 DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
60462-9 | http://loinc.org | Herpes simplex virus 2 DNA [#/volume] (viral load) in Specimen by NAA with probe detection |
60528-7 | http://loinc.org | Enterovirus subtype in Specimen by NAA with probe detection |
60530-3 | http://loinc.org | Influenza virus A H9 RNA [Presence] in Isolate by NAA with probe detection |
60538-6 | http://loinc.org | Influenza virus A H1+H3+B RNA [Presence] in Specimen by NAA with probe detection |
61101-2 | http://loinc.org | Influenza virus A neuraminidase RNA [Type] in Specimen by Sequencing |
61199-6 | http://loinc.org | HIV 1 integrase gene mutations detected [Identifier] |
61363-8 | http://loinc.org | Adenovirus 3+4+7+21 DNA [Presence] in Specimen by NAA with probe detection |
62471-8 | http://loinc.org | Herpes simplex virus 1 DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
62475-9 | http://loinc.org | Herpes simplex virus 2 DNA [#/volume] (viral load) in Tissue by NAA with probe detection |
62485-8 | http://loinc.org | Herpes virus 6A DNA [Presence] in Specimen by NAA with probe detection |
62486-6 | http://loinc.org | Herpes virus 6B DNA [Presence] in Specimen by NAA with probe detection |
62861-0 | http://loinc.org | Enterovirus 71 RNA [Presence] in Specimen by NAA with probe detection |
6307-3 | http://loinc.org | Adenovirus rRNA [Presence] in Tissue by Probe |
6308-1 | http://loinc.org | Adenovirus rRNA [Presence] in Specimen by Probe |
64038-3 | http://loinc.org | Adenovirus DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection |
66720-4 | http://loinc.org | Adenovirus DNA [Log #/volume] (viral load) in Body fluid by NAA with probe detection |
66721-2 | http://loinc.org | Adenovirus DNA [#/volume] (viral load) in Body fluid by NAA with probe detection |
66722-0 | http://loinc.org | Adenovirus DNA [Log #/volume] (viral load) in Tissue by NAA with probe detection |
68986-9 | http://loinc.org | Influenza virus A H5a RNA [Presence] in Specimen by NAA with probe detection |
68987-7 | http://loinc.org | Influenza virus A H5b RNA [Presence] in Specimen by NAA with probe detection |
72605-9 | http://loinc.org | Cytomegalovirus glycoprotein genotype in Specimen by NAA with probe detection |
72833-7 | http://loinc.org | Cytomegalovirus UL97 gene mutations detected [Identifier] |
72838-6 | http://loinc.org | Herpes simplex virus DNA [Identifier] in Specimen by NAA with probe detection |
73658-7 | http://loinc.org | HIV 1 subtype in Specimen by NAA with probe detection |
73659-5 | http://loinc.org | HIV 2 subtype in Specimen by NAA with probe detection |
74038-1 | http://loinc.org | Influenza virus A H1 RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
74039-9 | http://loinc.org | Influenza virus A H3 RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
74040-7 | http://loinc.org | Influenza virus A N2 RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
74423-5 | http://loinc.org | Enterovirus RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
74853-3 | http://loinc.org | HIV 1 proviral DNA [Presence] in Specimen by NAA with probe detection |
74855-8 | http://loinc.org | HIV 1 proviral DNA [Log #/volume] (viral load) in Specimen by NAA with probe detection |
76072-8 | http://loinc.org | Enterovirus D68 RNA [Presence] in Specimen by NAA with probe detection |
77605-4 | http://loinc.org | Influenza virus A H5 RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
78008-0 | http://loinc.org | HIV 1 proviral DNA [Entitic number] (viral load) in Mononuclear cells from unspecified specimen by NAA with probe detection |
78010-6 | http://loinc.org | HIV 1 proviral DNA [Logarithmic entitic number] (viral load) in Mononuclear cells from unspecified specimen by NAA with probe detection |
83325-1 | http://loinc.org | HIV 1 RNA genotype in Isolate |
83326-9 | http://loinc.org | HIV 1 RNA genotype and phenotype in Isolate |
83327-7 | http://loinc.org | HIV 1 RNA phenotype in Isolate |
85535-3 | http://loinc.org | Influenza virus A RNA TCID50 [#/volume] in Specimen |
85796-1 | http://loinc.org | Rubella virus E1 gene [Cycle Threshold #] in Specimen by NAA with probe detection |
85798-7 | http://loinc.org | Measles virus N gene [Cycle Threshold #] in Specimen by NAA with probe detection |
85800-1 | http://loinc.org | Mumps virus SH gene [Cycle Threshold #] in Specimen by NAA with probe detection |
86317-5 | http://loinc.org | Influenza virus A H1 2009 pandemic RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
86328-2 | http://loinc.org | Adenovirus B(21) DNA [Presence] in Specimen by NAA with probe detection |
86329-0 | http://loinc.org | Adenovirus B(16) DNA [Presence] in Specimen by NAA with probe detection |
86330-8 | http://loinc.org | Adenovirus B(11) DNA [Presence] in Specimen by NAA with probe detection |
86331-6 | http://loinc.org | Adenovirus B(14) DNA [Presence] in Specimen by NAA with probe detection |
86332-4 | http://loinc.org | Adenovirus B(7) DNA [Presence] in Specimen by NAA with probe detection |
86333-2 | http://loinc.org | Adenovirus E(4) DNA [Presence] in Specimen by NAA with probe detection |
86334-0 | http://loinc.org | Adenovirus B(3) DNA [Presence] in Specimen by NAA with probe detection |
86502-2 | http://loinc.org | Varicella zoster virus strain DNA [Type] in Specimen by NAA with probe detection |
86509-7 | http://loinc.org | Varicella zoster virus clade [Type] in Specimen by Molecular genetics method |
86510-5 | http://loinc.org | Adenovirus DNA [Presence] in Tissue by NAA with probe detection |
86539-4 | http://loinc.org | Herpes simplex virus 1 DNA [Presence] in Tissue by NAA with probe detection |
86541-0 | http://loinc.org | Herpes simplex virus 2 DNA [Presence] in Tissue by NAA with probe detection |
86542-8 | http://loinc.org | Herpes simplex virus DNA [Presence] in Tissue by NAA with probe detection |
86569-1 | http://loinc.org | Influenza virus A RNA [Presence] in Tissue by NAA with probe detection |
87316-6 | http://loinc.org | Enterovirus G RNA [Presence] in Specimen by NAA with probe detection |
87714-2 | http://loinc.org | Influenza virus A M gene [Nucleotide sequence] in Isolate by Sequencing |
87715-9 | http://loinc.org | Influenza virus A HA gene [Nucleotide sequence] in Isolate by Sequencing |
87716-7 | http://loinc.org | Influenza virus A NA gene [Nucleotide sequence] in Isolate by Sequencing |
87960-1 | http://loinc.org | Enterovirus RNA [Presence] in Body fluid by NAA with probe detection |
87961-9 | http://loinc.org | Varicella zoster virus DNA [Presence] in Body fluid by NAA with probe detection |
88214-2 | http://loinc.org | Rabies virus RNA [Presence] in Tissue by NAA with probe detection |
88536-8 | http://loinc.org | Varicella zoster virus DNA [Presence] in Aspirate by NAA with probe detection |
88540-0 | http://loinc.org | Enterovirus RNA [Presence] in Aspirate by NAA with probe detection |
88541-8 | http://loinc.org | Adenovirus DNA [Presence] in Aspirate by NAA with probe detection |
88835-4 | http://loinc.org | Influenza virus A swine origin RNA [Cycle Threshold #] in Specimen by NAA with probe detection |
90450-8 | http://loinc.org | Herpes simplex virus DNA [Presence] in Aspirate by NAA with probe detection |
90451-6 | http://loinc.org | Herpes simplex virus 1 DNA [Presence] in Aspirate by NAA with probe detection |
90453-2 | http://loinc.org | Herpes simplex virus 2 DNA [Presence] in Aspirate by NAA with probe detection |
92828-3 | http://loinc.org | Adenovirus B+E DNA [Presence] in Specimen by NAA with probe detection |
93749-0 | http://loinc.org | Mumps virus N gene [Cycle Threshold #] in Specimen by NAA with probe detection |
93759-9 | http://loinc.org | Influenza virus A PB2 gene [Nucleotide sequence] in Isolate by Sequencing |
93760-7 | http://loinc.org | Influenza virus A PB1 gene [Nucleotide sequence] in Isolate by Sequencing |
93761-5 | http://loinc.org | Influenza virus A PA gene [Nucleotide sequence] in Isolate by Sequencing |
93762-3 | http://loinc.org | Influenza virus A NP gene [Nucleotide sequence] in Isolate by Sequencing |
93763-1 | http://loinc.org | Influenza virus A NS1 gene [Nucleotide sequence] in Isolate by Sequencing |
93856-3 | http://loinc.org | Enterovirus RNA [Presence] in Specimen by NAA with non-probe detection |
94581-6 | http://loinc.org | Herpes simplex virus 1 DNA [Presence] in Specimen by NAA with non-probe detection |
94582-4 | http://loinc.org | Herpes simplex virus 2 DNA [Presence] in Specimen by NAA with non-probe detection |
94584-0 | http://loinc.org | Varicella zoster virus DNA [Presence] in Specimen by NAA with non-probe detection |
95658-1 | http://loinc.org | Influenza virus A H7 Eurasia RNA [Presence] in Specimen by NAA with probe detection |
95659-9 | http://loinc.org | Adenovirus RNA [Presence] in Specimen by NAA with probe detection |
96396-7 | http://loinc.org | Cytomegalovirus DNA [log units/volume] (viral load) in Specimen by NAA with probe detection |
97732-2 | http://loinc.org | Enterovirus VP1 gene [Nucleotide sequence] in Isolate by Sequencing |
97922-9 | http://loinc.org | California encephalitis virus RNA [Presence] in Specimen by NAA with probe detection |
97924-5 | http://loinc.org | Jamestown canyon virus RNA [Presence] in Specimen by NAA with probe detection |
97932-8 | http://loinc.org | Colorado tick fever virus RNA [Presence] in Specimen by NAA with probe detection |
97951-8 | http://loinc.org | Venezuelan equine encephalitis virus RNA [Presence] in Specimen by NAA with probe detection |
99623-1 | http://loinc.org | Influenza virus A N1 RNA [Presence] in Specimen by NAA with probe detection |
Produced 08 Sep 2023