|
Code
|
Display
|
Definition
|
|
C39-1
|
CKIT |
CKIT |
|
C39-2
|
b-catenine |
b-catenine |
|
C39-3
|
CKIT/DOG1 |
CKIT/DOG1 |
|
C39-4
|
FOXL2/DICER |
FOXL2/DICER |
|
C39-5
|
ETV6-NTRK3 |
ETV6-NTRK3 |
|
C39-6
|
MYB-NFIB |
MYB-NFIB |
|
C39-7
|
PDGFRA/FGFR1 |
PDGFRA/FGFR1 |
|
C39-8
|
MDM2 |
MDM2 |
|
C39-9
|
N-MYC |
N-MYC |
|
C39-10
|
C-MYC |
C-MYC |
|
C39-11
|
BCR-ABL1 |
BCR-ABL1 |
|
C39-12
|
COL1A1 |
COL1A1 |
|
C39-13
|
DDIT3 |
DDIT3 |
|
C39-14
|
EWSR2 |
EWSR2 |
|
C39-15
|
SYT |
SYT |
|
C39-16
|
CTNNB1 |
CTNNB1 |
|
C39-17
|
FUS |
FUS |
|
C39-18
|
IGH-BCL2 |
IGH-BCL2 |
|
C39-19
|
JAZF1 |
JAZF1 |
|
C39-20
|
FOXO1A |
FOXO1A |
|
C39-21
|
TFE3 |
TFE3 |
|
C39-22
|
HPV |
HPV |
|
C39-23
|
Merkell |
Merkell |
|
C39-24
|
EBER |
EBER |
|
C39-25
|
PSA |
PSA |
|
C39-26
|
CA125 |
CA125 |
|
C39-27
|
CA153 |
CA153 |
|
C39-28
|
CA199 |
CA199 |
|
C39-29
|
Ki67 |
Ki67 |
|
C39-30
|
Nb mitoses |
Nb mitoses |
|
C39-31
|
RO |
RO |
|
C39-32
|
RP |
RP |
|
C39-33
|
HER2 |
HER2 |
|
C39-34
|
PD-L1 |
PD-L1 |
|
C39-35
|
AMHR2 |
AMHR2 |
|
C39-36
|
P53 |
P53 |
|
C39-37
|
BRCA |
BRCA |
|
C39-38
|
MSI |
MSI |
|
C39-39
|
CDK12 |
CDK12 |
|
C39-40
|
BRAF |
BRAF |
|
C39-41
|
NRAS-KRAS |
NRAS-KRAS |
|
C39-42
|
EGFR |
EGFR |
|
C39-43
|
ALK |
ALK |
|
C39-44
|
ROS1 |
ROS1 |
|
C39-45
|
C-MET |
C-MET |
|
C39-46
|
ESR1 |
ESR1 |
|
C39-47
|
PAM50 |
PAM50 |
|
C39-48
|
ENDOPREDICT |
ENDOPREDICT |
|
C37-1
|
Biology |
Biology |
|
C37-2
|
Imaging |
Imaging |
|
C37-3
|
Omic |
Omic |
|
C37-4
|
Pathology |
Pathology |
|
C27-1
|
5th edition |
UICC TNM Classification 5th edition |
|
C27-2
|
6th edition |
UICC TNM Classification 6th edition |
|
C27-3
|
7th edition |
UICC TNM Classification 7th edition |
|
O59-1
|
Normal |
Normal sample |
|
O59-2
|
Tumoral |
Tumoral sample |
|
C60-1
|
Room temperature |
Room temperature |
|
C60-2
|
Between 2 °C and 10 °C |
Between 2 °C and 10 °C |
|
C60-3
|
Between -18 °C and -35 °C |
Between -18 °C and -35 °C |
|
C60-4
|
Between -60 °C and -85 °C |
Between -60 °C and -85 °C |
|
C60-5
|
Liquid nitrogen, -150 °C to -196 °C |
Liquid nitrogen, -150 °C to -196 °C |
|
O6-1
|
ChIP-on-Chip |
ChIP-on-Chip |
|
O6-2
|
ChIP-seq |
ChIP-seq |
|
O6-3
|
DNA microarray |
DNA microarray |
|
O6-4
|
DNA targeted panel sequencing |
DNA targeted panel sequencing |
|
O6-5
|
Exome sequencing |
Exome sequencing |
|
O6-6
|
Mass spectrometry |
Mass spectrometry |
|
O6-7
|
MeDIP-Chip |
MeDIP-Chip |
|
O6-8
|
MeDIP-seq |
MeDIP-seq |
|
O6-9
|
Methylation microarray |
Methylation microarray |
|
O6-10
|
RNA microarray |
RNA microarray |
|
O6-11
|
RNA targeted panel sequencing |
RNA targeted panel sequencing |
|
O6-12
|
RNA-seq |
RNA-seq |
|
O6-13
|
RPPA |
RPPA |
|
O6-14
|
Whole genome bisulfite sequencing |
Whole genome bisulfite sequencing |
|
O6-15
|
Whole genome sequencing |
Whole genome sequencing |
|
O6-16
|
miRNA microarray |
miRNA microarray |
|
O90-1
|
Fusion transcript |
Fusion transcript |
|
O90-3
|
Population frequency |
Population frequency |
|
O90-4
|
Protein reference |
Protein reference |
|
O90-5
|
Transcript reference |
Transcript reference |
|
O90-6
|
Variant id |
Variant id |
|
O19-1
|
MT |
Mitochondrial genetic material |
|
O19-2
|
viral |
Viral genetic material |
|
O19-3
|
bacterial |
Bacterial genetic material |
|
O63-1
|
SIFT |
SIFT |
|
O63-2
|
POLYPHEN2_HDIV |
POLYPHEN2_HDIV |
|
O63-3
|
MutationTaster |
MutationTaster |
|
O81-1
|
Pathogenic |
Pathogenic |
|
O81-2
|
Likely pathogenic |
Likely pathogenic |
|
O81-3
|
Uncertain significance |
Uncertain significance |
|
O81-4
|
Likely benign |
Likely benign |
|
O81-5
|
Benign |
Benign |
|
O16-1
|
Experimental |
Experimental |
|
O16-2
|
By biologist |
By biologist |
|
O16-3
|
In silico |
In silico |
|
O84-1
|
RawExpression |
RawExpression |
|
O84-2
|
NormalizedExpression |
NormalizedExpression |
|
O84-3
|
TPMExpression |
TPMExpression |
|
O84-4
|
RPKMExpression |
RPKMExpression |
|
O28-1
|
readthrough |
readthrough |
|
C60-6
|
Other |
Other |
|
C77-6
|
Other |
Other |
|
O6-OTH
|
Other |
Other |
|
O13-OTH
|
Other |
Other |
|
O7-1
|
Affymetrix Cytoscan HD |
|
|
O7-2
|
Affymetrix EMET Plus Premier Pack |
|
|
O7-3
|
Affymetrix Genome-Wide Human SNP Array 5.0 |
|
|
O7-4
|
Affymetrix Genome-Wide Human SNP Array 6.0 |
|
|
O7-5
|
Affymetrix HT Human Genome U133A Array Plate Set |
|
|
O7-6
|
Affymetrix Human Exon 1.0 ST |
|
|
O7-7
|
Affymetrix Human Gene 1.0 ST |
|
|
O7-8
|
Affymetrix Human Genome U219 Array Plate |
|
|
O7-9
|
Affymetrix Human MIP 330K |
|
|
O7-10
|
Affymetrix Human U133 Plus 2.0 |
|
|
O7-11
|
Affymetrix Human U133 Plus PM |
|
|
O7-12
|
Affymetrix Mapping 100K Array Set |
|
|
O7-13
|
Affymetrix Mapping 10K 2.0 Array Set |
|
|
O7-14
|
Affymetrix Mapping 500K Array Set |
|
|
O7-15
|
Affymetrix OncoScan FFPE Express 2.0 |
|
|
O7-16
|
Agilent 244K Custom Gene Expression G4502A-07 |
|
|
O7-17
|
Agilent 244K Custom Gene Expression G4502A-07-1 |
|
|
O7-18
|
Agilent 244K Custom Gene Expression G4502A-07-2 |
|
|
O7-19
|
Agilent 244K Custom Gene Expression G4502A-07-3 |
|
|
O7-20
|
Agilent 8 x 15K Human miRNA-specific microarray |
|
|
O7-21
|
Agilent Human CGH 1x1M |
|
|
O7-22
|
Agilent Human CGH 2x400K |
|
|
O7-23
|
Agilent Human CGH 4x180K |
|
|
O7-24
|
Agilent Human CGH 8x60K |
|
|
O7-25
|
Agilent Human CNV 2x400K |
|
|
O7-26
|
Agilent Human CNV Association 2x105K |
|
|
O7-27
|
Agilent Human CpG Island Microarray Kit |
|
|
O7-28
|
Agilent Human Genome 105A |
|
|
O7-29
|
Agilent Human Genome 244A |
|
|
O7-30
|
Agilent Human Genome 44K |
|
|
O7-31
|
Agilent Human Genome CGH Custom Microaary 2x415K |
|
|
O7-32
|
Agilent Human miRNA Microarray Kit (v2) |
|
|
O7-33
|
Agilent Human Promoter ChIP-on-chip Microarray Set |
|
|
O7-34
|
Agilent Human SpliceArray |
|
|
O7-35
|
Agilent Whole Human Genome Oligo Microarray Kit |
|
|
O7-36
|
Almac Human CRC |
|
|
O7-37
|
capillary sequencing |
|
|
O7-38
|
Complete Genomics |
|
|
O7-39
|
Custom-designed cDNA array |
|
|
O7-40
|
Custom-designed gene expression array |
|
|
O7-41
|
Helicos sequencing |
|
|
O7-42
|
HumanOmni2.5-8 BeadChip Kit |
|
|
O7-43
|
Illumina GA sequencing |
|
|
O7-44
|
Illumina goldengate methylation |
|
|
O7-45
|
Illumina GoldenGate Methylation Cancer Panel I |
|
|
O7-46
|
Illumina HiSeq |
|
|
O7-47
|
Illumina HiSeq X Ten |
|
|
O7-48
|
Illumina Human Omni1-Quad beadchip |
|
|
O7-49
|
Illumina Human1M OmniQuad chip |
|
|
O7-50
|
Illumina human1m-duo |
|
|
O7-51
|
Illumina human510s-duo |
|
|
O7-52
|
Illumina human660w-quad |
|
|
O7-53
|
Illumina HumanCNV370-Duo v1.0 BeadChip |
|
|
O7-54
|
Illumina humancytosnp-12 |
|
|
O7-55
|
Illumina HumanHap550 |
|
|
O7-56
|
Illumina HumanHT-12 v4.0 beadchip |
|
|
O7-57
|
Illumina humanht-16 |
|
|
O7-58
|
Illumina humanht-17 |
|
|
O7-59
|
Illumina humanmethylation27 |
|
|
O7-60
|
Illumina HumanOmniExpress BeadChip |
|
|
O7-61
|
Illumina HumanRef-8 v3.0 beadchip |
|
|
O7-62
|
Illumina HumanWG-6 v3.0 beadchip |
|
|
O7-63
|
Illumina Infinium HumanMethylation450 |
|
|
O7-64
|
Illumina microRNA Expression Profiling Panel |
|
|
O7-65
|
Illumina MiSeq Personal Sequencer |
|
|
O7-66
|
Ion Torrent PGM |
|
|
O7-67
|
Ion Torrent Proton |
|
|
O7-68
|
M.D. Anderson Reverse Phase Protein Array Core |
|
|
O7-69
|
Microsatellite Instability Analysis |
|
|
O7-70
|
nanoString |
|
|
O7-71
|
Nimblegen CGS |
|
|
O7-72
|
Nimblegen Gene Expression 12x135K |
|
|
O7-73
|
Nimblegen Gene Expression 385K |
|
|
O7-74
|
Nimblegen Gene Expression 4x72K |
|
|
O7-75
|
Nimblegen Human CGH 2.1M Whole-Genome v2.0D Array |
|
|
O7-76
|
Nimblegen Human CGH 3x720 Whole-Genome v3.0 Array |
|
|
O7-77
|
Nimblegen Human Methylation 2.1M Whole-Genome sets |
|
|
O7-78
|
Nimblegen Human Methylation 385K Whole-Genome sets |
|
|
O7-79
|
PacBio RS sequencing |
|
|
O7-80
|
PCR |
|
|
O7-81
|
PCR and capillary sequencing |
|
|
O7-82
|
qPCR |
|
|
O7-83
|
Roche 454 sequencing |
|
|
O7-84
|
Sequenom MassARRAY |
|
|
O7-85
|
SOLiD sequencing |
|
|
O7-86
|
Digital PCR |
|
|
O7-87
|
NextSeq 500 |
|
|
O7-88
|
NovaSeq |
|
|
O7-OTH
|
Other |
|
|
O10-1
|
Ion AmpliSeq Cancer Hotspot Panel v2 |
|
|
O10-2
|
Ion AmpliSeq Colon and Lung Cancer Research Panel v2 |
|
|
O10-3
|
Ion AmpliSeq Comprehensive Cancer Panel |
|
|
O10-4
|
Ion AmpliSeq Oncomine Comprehensive Assay |
|
|
O10-5
|
Ion AmpliSeq Oncomine Focus Assay |
|
|
O10-6
|
Ion AmpliSeq TP53 Research Panel |
|
|
O10-7
|
Lyric: Ion AmpliSeq Profiler |
|
|
O10-8
|
QIAGEN GeneRead DNAseq Targeted Panels V2 |
|
|
O10-9
|
SAFIR02 Panel |
|
|
O10-10
|
Mosc3 |
|
|
010-OTH
|
Other |
|